GENES BY CLUSTER
First Category Select Cluster Download all clusters : txt File
Cluster Information
Cluster Name Number of Genes Number of Paralogous
VirD4/AvhD4/TraG 67 29
Gene NameGene ID Product SizeBiological source2ndcategory3rdcategory
traG AGR_pTi_bx12 Conjugal transfer protein TraG 658 Agrobacterium tumefaciens C58 Cereon VirD4/TraG Family Conjugation
avhD4 AGR_pAT_160 Type IV secretion system-coupling protein VirD4 639 Agrobacterium tumefaciens C58 Cereon VirD4/TraG Family Conjugation
traG Atu6124 Conjugal transfer protein TraG 658 Agrobacterium tumefaciens C58 UWash VirD4/TraG Family Conjugation
avhD4 Atu5108 Type IV secretion system-coupling protein VirD4 639 Agrobacterium tumefaciens C58 UWash VirD4/TraG Family Conjugation
traG mlr9747 Conjugal transfer protein TraG homolog 679 Mesorhizobium loti MAFF303099 VirD4/TraG Family Conjugation
traG RHE_PA00156 Conjugal transfer protein TraG 645 Rhizobium etli CFN 42 VirD4/TraG Family Conjugation
traG pRL80120 Conjugal transfer protein TraG 650 Rhizobium leguminosarum bv viciae 3841 VirD4/TraG Family Conjugation
avhD4 SMa0929 Type IV secretion system-coupling protein VirD4 homolog 639 Sinorhizobium meliloti 1021 VirD4/TraG Family Conjugation
cmgD4 CJJ81176_pTet0040 Type IV secretion system-coupling protein VirD4 homolog 603 Campylobacter jejuni subsp. jejuni 81-176 VirD4/TraG Family Conjugation
traG CAD31437.1 Conjugal transfer protein TraG homolog 783 Mesorhizobium loti R7A VirD4/TraG Family Conjugation
traG pIncPalpha_00315 Conjugal transfer protein TraG 635 Birmingham IncP-alpha plasmid VirD4/TraG Family Conjugation
traG pB3_p41 Conjugal transfer protein TraG (IncP-1beta pB3) 637 Plasmid pB3 VirD4/TraG Family Conjugation
traG pB8_043 Conjugal transfer protein TraG (IncP-1beta pB8) 637 IncP-1beta multiresistance plasmid pB8 VirD4/TraG Family Conjugation
traG pKJK5_44 Conjugal transfer protein TraG (IncP-1 pKJK5) 634 IncP-1 plasmid pKJK5 VirD4/TraG Family Conjugation
traN pSB102_p23 Conjugal transfer protein TraN (TraNpSB102) 909 Plasmid pSB102 VirD4/TraG Family Conjugation
lvhD4 lpg1245 Type IV secretion system-coupling protein VirD4 homolog 691 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 VirD4/TraG Family Conjugation and Effector translocator
lvhD4 lpl0162 Type IV secretion system-coupling protein VirD4 homolog 633 Legionella pneumophila Lens VirD4/TraG Family Conjugation and Effector translocator
lvhD4 lpp0180 Type IV secretion system-coupling protein VirD4 homolog 633 Legionella pneumophila Paris VirD4/TraG Family Conjugation and Effector translocator
virD4 CJJ81176_pVir0007 Type IV secretion system-coupling protein VirD4 homolog 628 Campylobacter jejuni subsp. jejuni 81-176 VirD4/TraG Family DNA Uptake/Release
virD4 AGR_pTi_23 Type IV secretion system-coupling protein VirD4 668 Agrobacterium tumefaciens C58 Cereon VirD4/TraG Family Effector and T-DNA translocator
virD4 Atu6184 Type IV secretion system-coupling protein VirD4 668 Agrobacterium tumefaciens C58 UWash VirD4/TraG Family Effector and T-DNA translocator
virD4 BH13380 Type IV secretion system-coupling protein VirD4 639 Bartonella henselae str. Houston-1 VirD4/TraG Family Effector translocator
virD4 BQ10640 Type IV secretion system-coupling protein VirD4 639 Bartonella quintana Toulouse VirD4/TraG Family Effector translocator
cag5 HP0524 Type IV secretion system-coupling protein VirD4 748 Helicobacter pylori 26695 VirD4/TraG Family Effector translocator
virD4 HPAG1_0499 Type IV secretion system-coupling protein VirD4 748 Helicobacter pylori HPAG1 VirD4/TraG Family Effector translocator
virD4 CAD31465.1 Type IV secretion system-coupling protein VirD4 581 Mesorhizobium loti R7A VirD4/TraG Family Effector translocator
avhD4 Meso_4331 Type IV secretion system-coupling protein VirD4 homolog 639 Mesorhizobium BNC1 VirD4/TraG Family Probable conjugation
avhD4 Meso_4169 Type IV secretion system-coupling protein VirD4 homolog 678 Mesorhizobium BNC1 VirD4/TraG Family Probable conjugation
avhD4 Nham_4436 Type IV secretion system-coupling protein VirD4 homolog 714 Nitrobacter hamburgensis X14 VirD4/TraG Family Probable conjugation
traG Nham_4672 Conjugal transfer protein TraG 641 Nitrobacter hamburgensis X14 VirD4/TraG Family Probable conjugation
virD4 pRL70071 Type IV secretion system-coupling protein VirD4 684 Rhizobium leguminosarum bv viciae 3841 VirD4/TraG Family Probable conjugation
avhD4 XFa0016 Type IV secretion system-coupling protein VirD4 homolog 656 Xylella fastidiosa 9a5c VirD4/TraG Family Probable conjugation
virD4 RHE_PA00070 Type IV secretion system-coupling protein VirD4 666 Rhizobium etli CFN 42 VirD4/TraG Family Probable effector translocator
virD4 A1C_02075 Type IV secretion system-coupling protein VirD4 591 Rickettsia akari Hartford VirD4/TraG Family Probable effector translocator
virD4 A1I_02285 Type IV secretion system-coupling protein VirD4 592 Rickettsia bellii OSU 85-389 VirD4/TraG Family Probable effector translocator
virD4 A1G_02240 Type IV secretion system-coupling protein VirD4 591 Rickettsia rickettsii Sheila Smith VirD4/TraG Family Probable effector translocator
virD4 RT0284 Type IV secretion system-coupling protein VirD4 591 Rickettsia typhi wilmington VirD4/TraG Family Probable effector translocator
avhD4 gbs1128 Type IV secretion system-coupling protein VirD4 homolog 681 Streptococcus agalactiae NEM316 VirD4/TraG Family Probable effector translocator
avhD4 gbs1364 Type IV secretion system-coupling protein VirD4 homolog 605 Streptococcus agalactiae NEM316 VirD4/TraG Family Probable effector translocator
traG AGR_L_58 Conjugal transfer protein TraG homolog 554 Agrobacterium tumefaciens C58 Cereon VirD4/TraG Family Unknown
traG Atu4858 Conjugal transfer protein TraG homolog 554 Agrobacterium tumefaciens C58 UWash VirD4/TraG Family Unknown
traG bll0043 Conjugal transfer protein TraG homolog 675 Bradyrhizobium japonicum USDA 110 VirD4/TraG Family Unknown
traG BBta_7438 Conjugal transfer protein TraG homolog 660 Bradyrhizobium sp. BTAi1 VirD4/TraG Family Unknown
traG BBta_7739 Conjugal transfer protein TraG homolog 661 Bradyrhizobium sp. BTAi1 VirD4/TraG Family Unknown
avhD4 BBta_p0247 Type IV secretion system-coupling protein VirD4 homolog 648 Bradyrhizobium sp. BTAi1 VirD4/TraG Family Unknown
traG BBta_3356 Conjugal transfer protein TraG homolog 666 Bradyrhizobium sp. BTAi1 VirD4/TraG Family Unknown
avhD4 BRADO6373 Type IV secretion system-coupling protein VirD4 homolog 538 Bradyrhizobium sp. ORS278 VirD4/TraG Family Unknown
avhD4 Bcen_4843 Type IV secretion system-coupling protein VirD4 homolog 557 Burkholderia cenocepacia AU 1054 VirD4/TraG Family Unknown
avhD4 Bxe_A1764 Type IV secretion system-coupling protein VirD4 homolog 575 Burkholderia xenovorans LB400 VirD4/TraG Family Unknown
avhD4 Bxe_A2647 Type IV secretion system-coupling protein VirD4 homolog 576 Burkholderia xenovorans LB400 VirD4/TraG Family Unknown
avhD4 Bxe_C0458 Type IV snecretion system-coupling protein VirD4 homolog 593 Burkholderia xenovorans LB400 VirD4/TraG Family Unknown
avhD4 mlr9261 Type IV secretion system-coupling protein VirD4 homolog 775 Mesorhizobium loti MAFF303099 VirD4/TraG Family Unknown
traG mlr6395 Conjugal transfer protein TraG homolog 735 Mesorhizobium loti MAFF303099 VirD4/TraG Family Unknown
traG Meso_2327 Conjugal transfer protein TraG homolog 662 Mesorhizobium BNC1 VirD4/TraG Family Unknown
traG Meso_3849 Conjugal transfer protein TraG homolog 664 Mesorhizobium BNC1 VirD4/TraG Family Unknown
traG Meso_0515 Conjugal transfer protein TraG homolog 662 Mesorhizobium BNC1 VirD4/TraG Family Unknown
avhD4 Nham_0593 Type IV secretion system-coupling protein VirD4 homolog 575 Nitrobacter hamburgensis X14 VirD4/TraG Family Unknown
avhD4 OTBS_0007 Type IV secretion system-coupling protein VirD4 homolog 590 Orientia tsutsugamushi str. Boryong VirD4/TraG Family Unknown
avhD4 RHE_CH01975 Type IV secretion system-coupling protein VirD4 homolog 519 Rhizobium etli CFN 42 VirD4/TraG Family Unknown
traG RHE_PD00167 Conjugal transfer protein TraG homolog 639 Rhizobium etli CFN 42 VirD4/TraG Family Unknown
traG pRL120565 Conjugal transfer protein TraG homolog 562 Rhizobium leguminosarum bv viciae 3841 VirD4/TraG Family Unknown
traG pRL100217 Conjugal transfer protein TraG homolog 561 Rhizobium leguminosarum bv viciae 3841 VirD4/TraG Family Unknown
avhD4 AAM03042 Type IV secretion system-coupling protein VirD4 homolog 747 Helicobacter pylori J99 VirD4/TraG Family Unknown
traG Saro_0320 Conjugal transfer protein TraG homolog 661 Novosphingobium aromaticivorans DSM 12444 VirD4/TraG Family Unknown
traG Rmet_1339 Conjugal transfer protein TraG homolog 664 Ralstonia metallidurans CH34 VirD4/TraG Family Unknown
traG Rmet_1548 Conjugal transfer protein TraG homolog 664 Ralstonia metallidurans CH34 VirD4/TraG Family Unknown
avhD4 XCC2483 Type IV secretion system-coupling protein VirD4 homolog 557 Xanthomonas campestris pv. campestris str. ATCC 33913 VirD4/TraG Family Unknown
Multiple alignment: Clustalw | Muscle | Phylogenetic trees: ps | pdf | legend:txt Download: Fasta