ORF information
ORF ID TF00046 (frame 1) Gene ID SMa0929
Position and sequences 513088...515007(639 aa) Gene Name/synonym avhD4 -
Organism Sinorhizobium meliloti 1021 Cluster 67 genes
Product Type IV secretion system-coupling protein VirD4 homolog
1stcategory P-T4SS 2ndcategory VirD4/TraG Family
3rdcategory Conjugation
Function Component of the T4SS virB/D4 homolog that is required for conjugal transfer of the pSymA. However T4SS virB/D4 homolog is not required for the intracellular survival of the bacteria, thus it appears to be dispensable for plant symbiosis.
Miscellaneus
References PubMed:11481432  PubMed:17158676 

Functional Annotation
  KEGG database
Organism S.meliloti Gene entry SMa0929
Gene name traG Synonyms
Definition TraG conjugal transfer protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:sme03080]
Classification Sorting and Degradation
DBLinks GeneID 1235538 GI 16262955 UniProt Q92ZI3
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 222 .. 639 (418) Type IV secretory pathway, VirD4 components

Blast results (KEGG)
S.meliloti :  BlastP (output)
Score Expect Query coverage Subject coverage
1268 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR02767 TraG-Ti [ 0 - 634 ] IPR014135 Ti-type conjugative transfer system, TraG
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
655 0.0 97.6526 98.5915 Q6G2A8 Type IV secretion system-coupling protein virD4

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)