ORF ID	TF00008 (frame 1)	Gene ID	Atu5108
Position and sequences	113538...115457(639 aa)	Gene Name/synonym	avhD4 /virD4
Organism	Agrobacterium tumefaciens C58 UWash	Cluster	67 genes
Product	Type IV secretion system-coupling protein VirD4
1stcategory	P-T4SS	2ndcategory	VirD4/TraG Family
3rdcategory	Conjugation
Function	Component of the T4SS AvhB (Agrobacterium virulence homologue virB) that mediates the conjugal transfer of the pAtC58 cryptic plasmid between cells of Agrobacterium. The pAtC58 transfer occurs predominantly under soil and rhizosphere conditions in the absence of tumor or plant wound sites, suggesting that this plasmid may play a key role in these environments.
Miscellaneus	Both, pRSF1010 and pTiC58 inhibit conjugal transfer of pAtC58, suggesting an overlap between these delivery systems.
References	PubMed:12169609

	KEGG database
Organism	A.tumefaciens_C	Gene entry	AGR_pAT_16
Gene name	traG	Synonyms
Definition	conjugal transfer protein TraG
Class	Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification	Sorting and Degradation
DBLinks	GeneID 1142318 GI 16119337 UniProt Q8UKJ4
	COG Clusters of Orthologous Groups of proteins
	Gene Classification Coords (size) Product U 222 .. 639 (418) Type IV secretory pathway, VirD4 components

A.tumefaciens_C :  BlastP (output)

Score Expect Query coverage Subject coverage 1275 0.0 100 100

Evidence ID Name Loci start-end InterPro ID InterPro Name HMMTigr TIGR02767 TraG-Ti [ 0 - 634 ] IPR014135 Ti-type conjugative transfer system, TraG

GO	No results found !

Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result) 648 0.0 97.8091 98.748 Q6G2A8 Type IV secretion system-coupling protein virD4

PHOBIUS	txt

Psort	(output)