ORF information
ORF ID TF01773 (frame 1) Gene ID A1G_02240
Position and sequences 394925...396700(591 aa) Gene Name/synonym virD4 -
Organism Rickettsia rickettsii Sheila Smith Cluster 67 genes
Product Type IV secretion system-coupling protein VirD4
1stcategory P-T4SS 2ndcategory VirD4/TraG Family
3rdcategory Probable effector translocator
Function Unpublished data suggests that Rickettsia VirD4 is capable of binding putative effectors of the T4SS.
Miscellaneus The Rickettsia VirD4 gene is conserved across 13 genomes, and the corresponding amino acid sequence is highly conserved when compared across divergent pathogenic bacterial type IV coupling proteins (T4CPs), particularly within the five conserved motifs of the two large C-terminal domains (CTDs).
References PubMed:19279686 

Functional Annotation
  KEGG database
Organism R.rickettsii_Iowa Gene entry RrIowa_047
Gene name virD Synonyms 4
Definition type IV secretion system component VirD4
Classification Unassigned
DBLinks GeneID 5850037 GI 165932969 Pfam TraG PROSITE LECTIN_LEGUME_BETA UniProt B0BWX6
 
 
COG No results found !

Blast results (KEGG)
R.rickettsii_Iowa :  BlastP (output)
Score Expect Query coverage Subject coverage
1188 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
ScanRegExp PS00307 LECTIN_LEGUME_BETA [ 0 - 299 ] IPR001220 Legume lectin, beta domain
HMMPfam PF02534 TraG [ 0 - 569 ] IPR003688 TRAG protein

GO (Gene Onthology)
ID Type Description
0005529 Molecular Function sugar binding
0009291 Biological Process unidirectional conjugation
0016020 Cellular Component membrane

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
231 9e-60 74.4501 66.5698 P09817 RecName: Full=Protein virD4

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)