ORF information
ORF ID TF00023 (frame 1) Gene ID lpg1245
Position and sequences 1374382...1376457(691 aa) Gene Name/synonym lvhD4 -
Organism Legionella pneumophila subsp. pneumophila str. Philadelphia 1 Cluster 67 genes
Product Type IV secretion system-coupling protein VirD4 homolog
1stcategory P-T4SS 2ndcategory VirD4/TraG Family
3rdcategory Conjugation and Effector translocator
Function Component of the type IV secretion system Legionella vir homologues (Lvh) that is partially required for conjugation. Also, the type IV system Lvh can act as an effector translocator preferentially involved in virulence-related phenotype under conditions mimicking the spread of Legionnaires's disease from environmental niches.
Miscellaneus
References PubMed:10564519  PubMed:17101653 

Functional Annotation
  KEGG database
Organism L.pneumophila Gene entry lpg1245
Gene name virD Synonyms 4
Definition LvhD4
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:lpn03080]
Classification Sorting and Degradation
DBLinks GeneID 3077705 GI 52841477 UniProt Q5ZW42
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 192 .. 687 (496) Type IV secretory pathway, VirD4 components

Blast results (KEGG)
L.pneumophila :  BlastP (output)
Score Expect Query coverage Subject coverage
1400 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF02534 TraG [ 0 - 668 ] IPR003688 TRAG protein

GO (Gene Onthology)
ID Type Description
0009291 Biological Process unidirectional conjugation
0016020 Cellular Component membrane

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
190 2e-47 67.4385 69.4767 P09817 Protein virD4

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)