ORF information
ORF ID TF01006 (frame 1) Gene ID pIncPalpha_00315
Position and sequences 46588...48495(635 aa) Gene Name/synonym traG -
Organism Birmingham IncP-alpha plasmid Cluster 67 genes
Product Conjugal transfer protein TraG
1stcategory P-T4SS 2ndcategory VirD4/TraG Family
3rdcategory Conjugation
Function Component of the Tra system that constitutes the Tra1 block, which is mainly concerned with triggering DNA transfer. TraG is essential for mobilization of IncP plasmids. May bind tightly and specifically to the relaxase traI. May also bind to DNA without sequence specificity. May form a pore-like structure that could serve as a channel for DNA transfer.
Miscellaneus For transfer the plasmid requires two blocks of genes. The transfer origin, oriT and genes traA to traM constitute the Tra1 block, which is mainly concerned with triggering DNA transfer, while the genes trbA to trbP form a Tra2 operon concerned mainly with mating pair formation.
References PubMed:8954881  PubMed:11976307  PubMed:8021214 

Functional Annotation
  KEGG database
Organism R.eutropha Gene entry Reut_D6525
Gene name Synonyms
Definition TraG protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:reu03080]
Classification Sorting and Degradation
DBLinks GeneID 3607891 GI 72384327 JGI_p ReutD6525 UniProt Q6UP39
 
 
COG No results found !

Blast results (KEGG)
R.eutropha :  BlastP (output)
Score Expect Query coverage Subject coverage
1097 0.0 99.3701 99.2151

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF02534 TraG [ 0 - 624 ] IPR003688 TRAG protein

GO (Gene Onthology)
ID Type Description
0009291 Biological Process unidirectional conjugation
0016020 Cellular Component membrane

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
1291 0.0 100 100 Q00185 Conjugal transfer protein traG

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)