ORF information
ORF ID TF00040 (frame 1) Gene ID RHE_CH01975
Position and sequences 2058897...2060456(519 aa) Gene Name/synonym avhD4 -
Organism Rhizobium etli CFN 42 Cluster 67 genes
Product Type IV secretion system-coupling protein VirD4 homolog
1stcategory P-T4SS 2ndcategory VirD4/TraG Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_CH0197
Gene name Synonyms
Definition probable transport secretion system IV, VirD4 protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:ret03080]
Classification Sorting and Degradation
DBLinks GeneID 3894013 GI 86357595 UNAM RE1CH0001975 UniProt Q2K8S6
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 40 .. 508 (469) Type IV secretory pathway, VirD4 components

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
1057 0.0 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
113 2e-24 64.3545 50.8721 P09817 Protein virD4

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)