ORF information
ORF ID TF00042 (frame 1) Gene ID pRL70071
Position and sequences 56589...58643(684 aa) Gene Name/synonym virD4 -
Organism Rhizobium leguminosarum bv viciae 3841 Cluster 67 genes
Product Type IV secretion system-coupling protein VirD4
1stcategory P-T4SS 2ndcategory VirD4/TraG Family
3rdcategory Probable conjugation
Function Component of the T4SS VirB/D4 encoded in the plasmid pRL7, which may be required for conjugal transfer of the plasmid.
Miscellaneus R.leguminosarum biovar viciae (Rlv) strain 3841 (a spontaneous streptomycin-resistant mutant of field isolate 300) has six large plasmids; pRL10 is the pSym (symbiosis plasmid) and pRL7 and pRL8 are transferable by conjugation.
References PubMed:14617175 

Functional Annotation
  KEGG database
Organism R.leguminosarum Gene entry pRL70071
Gene name Synonyms
Definition putative transmembrane conjugative DNA transfer protein
Classification Unassigned
DBLinks GeneDB pRL70071 GeneID 4404358 GI 116254972
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 70 .. 674 (605) Type IV secretory pathway, VirD4 components

Blast results (KEGG)
R.leguminosarum :  BlastP (output)
Score Expect Query coverage Subject coverage
1350 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF02534 TraG [ 0 - 578 ] IPR003688 TRAG protein

GO (Gene Onthology)
ID Type Description
0009291 Biological Process unidirectional conjugation
0016020 Cellular Component membrane

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
843 0.0 95.3216 99.4012 P18594 Protein virD4

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)