GENES BY CLUSTER
First Category Select Cluster Download all clusters : txt File
Cluster Information
Cluster Name Number of Genes Number of Paralogous
VirB4/AvhB4/TrbE/CagE 68 26
Gene NameGene ID Product SizeBiological source2ndcategory3rdcategory
trbE AGR_pTi_83 Conjugal transfer protein TrbE 822 Agrobacterium tumefaciens C58 Cereon VirB4/TrbE/CagE Family Conjugation
avhB4 AGR_pAT_223 Type IV secretion system protein VirB4 homolog 795 Agrobacterium tumefaciens C58 Cereon VirB4/TrbE/CagE Family Conjugation
trbE Atu6038 Conjugal transfer protein TrbE 822 Agrobacterium tumefaciens C58 UWash VirB4/TrbE/CagE Family Conjugation
avhB4 Atu5165 Type IV secretion system protein VirB4 homolog 757 Agrobacterium tumefaciens C58 UWash VirB4/TrbE/CagE Family Conjugation
trbE mll9608 Conjugal transfer protein TrbE homolog 816 Mesorhizobium loti MAFF303099 VirB4/TrbE/CagE Family Conjugation
trbE RHE_PA00175 Conjugal transfer protein TrbE 818 Rhizobium etli CFN 42 VirB4/TrbE/CagE Family Conjugation
trbE pRL80139 Conjugal transfer protein TrbE homolog 811 Rhizobium leguminosarum bv viciae 3841 VirB4/TrbE/CagE Family Conjugation
avhB4 SMa1315 Type IV secretion system protein VirB4 homolog 792 Sinorhizobium meliloti 1021 VirB4/TrbE/CagE Family Conjugation
cmgB3/4 CJJ81176_pTet0028 Type IV secretion system protein VirB3/4 homolog 922 Campylobacter jejuni subsp. jejuni 81-176 VirB4/TrbE/CagE Family Conjugation
trbE Rmet_6305 Conjugal transfer protein TrbE homolog 818 Ralstonia metallidurans CH34 VirB4/TrbE/CagE Family Conjugation
trbE CAD31432.1 Conjugal transfer protein TrbE homolog 816 Mesorhizobium loti R7A VirB4/TrbE/CagE Family Conjugation
traB R46_012 Conjugal transfer protein TraB (IncN R46) 866 Plasmid R46 VirB4/TrbE/CagE Family Conjugation
trbE 152559 Conjugal transfer protein TrbE (IncP alpha RP4) 852 Plasmid RP4 VirB4/TrbE/CagE Family Conjugation
trbE pIncPalpha_00150 Conjugal transfer protein TrbE 852 Birmingham IncP-alpha plasmid VirB4/TrbE/CagE Family Conjugation
trbE pB3_p07 Conjugal transfer protein TrbE (IncP-1beta pB3) 852 Plasmid pB3 VirB4/TrbE/CagE Family Conjugation
trbE pB8_017 Conjugal transfer protein TrbE (IncP-1beta pB8) 852 IncP-1beta multiresistance plasmid pB8 VirB4/TrbE/CagE Family Conjugation
trbE pKJK5_7 Conjugal transfer protein TrbE (IncP-1 pKJK5) 852 IncP-1 plasmid pKJK5 VirB4/TrbE/CagE Family Conjugation
traE pSB102_p34 Conjugal transfer protein TraE (TraEpSB102) 829 Plasmid pSB102 VirB4/TrbE/CagE Family Conjugation
lvhB4 lpg1254 Type IV secretion system protein VirB4 homolog 826 Legionella pneumophila subsp. pneumophila str. Philadelphia 1 VirB4/TrbE/CagE Family Conjugation and Effector translocator
lvhB4 lpl0153 Type IV secretion system protein VirB4 homolog 826 Legionella pneumophila Lens VirB4/TrbE/CagE Family Conjugation and Effector translocator
lvhB4 lpp0171 Type IV secretion system protein VirB4 homolog 826 Legionella pneumophila Paris VirB4/TrbE/CagE Family Conjugation and Effector translocator
comB4 HP0017 Type IV secretion system protein VirB4 homolog 787 Helicobacter pylori 26695 VirB4/TrbE/CagE Family DNA Uptake/Release
comB4 HPAG1_0017 Type IV secretion system protein VirB4 homolog 787 Helicobacter pylori HPAG1 VirB4/TrbE/CagE Family DNA Uptake/Release
virB4 CJJ81176_pVir0053 Type IV secretion system protein VirB4 homolog 822 Campylobacter jejuni subsp. jejuni 81-176 VirB4/TrbE/CagE Family DNA Uptake/Release
virB4 AGR_pTi_8 Type IV secretion system protein VirB4 789 Agrobacterium tumefaciens C58 Cereon VirB4/TrbE/CagE Family Effector and T-DNA translocator
virB4 Atu6170 Type IV secretion system protein VirB4 789 Agrobacterium tumefaciens C58 UWash VirB4/TrbE/CagE Family Effector and T-DNA translocator
virB4 BH13280 Type IV secretion system protein VirB4 homolog 784 Bartonella henselae str. Houston-1 VirB4/TrbE/CagE Family Effector translocator
virB4 BQ10550 Type IV secretion system protein VirB4 homolog 784 Bartonella quintana Toulouse VirB4/TrbE/CagE Family Effector translocator
ptlC BP3790 Type IV secretion system protein PtlC 824 Bordetella pertussis Tohama I VirB4/TrbE/CagE Family Effector translocator
virB4 BRA0066 Type IV secretion system protein VirB4 homolog 831 Brucella suis 1330 VirB4/TrbE/CagE Family Effector translocator
cagE HP0544 Type IV secretion system protein VirB4 homolog 983 Helicobacter pylori 26695 VirB4/TrbE/CagE Family Effector translocator
virB4 CAD31459.1 Type IV secretion system protein VirB4 789 Mesorhizobium loti R7A VirB4/TrbE/CagE Family Effector translocator
avhB4 Meso_4177 Type IV secretion system protein VirB4 homolog 804 Mesorhizobium BNC1 VirB4/TrbE/CagE Family Probable conjugation
avhB4 Meso_4346 Type IV secretion system protein VirB4 homolog 793 Mesorhizobium BNC1 VirB4/TrbE/CagE Family Probable conjugation
avhB4 Nham_4445 Type IV secretion system protein VirB4 homolog 803 Nitrobacter hamburgensis X14 VirB4/TrbE/CagE Family Probable conjugation
trbE Nham_4566 Conjugal transfer protein TrbE homolog 817 Nitrobacter hamburgensis X14 VirB4/TrbE/CagE Family Probable conjugation
avhB4 pRL70152 Type IV secretion system protein VirB4 homolog 793 Rhizobium leguminosarum bv viciae 3841 VirB4/TrbE/CagE Family Probable conjugation
avhB4 XFa0007 Type IV secretion system protein VirB4 homolog 815 Xylella fastidiosa 9a5c VirB4/TrbE/CagE Family Probable conjugation
trwK BH15660 Type IV secretion system protein VirB4 homolog 823 Bartonella henselae str. Houston-1 VirB4/TrbE/CagE Family Probable effector translocator
trwK BQ12580 Type IV secretion system protein VirB4 homolog 823 Bartonella quintana Toulouse VirB4/TrbE/CagE Family Probable effector translocator
virB4 RHE_PA00045 Type IV secretion system protein VirB4 789 Rhizobium etli CFN 42 VirB4/TrbE/CagE Family Probable effector translocator
virB4 A1C_00785 Type IV secretion system protein VirB4 homolog 805 Rickettsia akari Hartford VirB4/TrbE/CagE Family Probable effector translocator
virB4 A1I_00950 Type IV secretion system protein VirB4 homolog 805 Rickettsia bellii OSU 85-389 VirB4/TrbE/CagE Family Probable effector translocator
virB4 A1G_00815 Type IV secretion system protein VirB4 homolog 805 Rickettsia rickettsii Sheila Smith VirB4/TrbE/CagE Family Probable effector translocator
virB4 RT0033 Type IV secretion system protein VirB4 homolog 805 Rickettsia typhi wilmington VirB4/TrbE/CagE Family Probable effector translocator
trbE bll8285 Conjugal transfer protein TrbE homolog 812 Bradyrhizobium japonicum USDA 110 VirB4/TrbE/CagE Family Unknown
trbE BBta_7443 Conjugal transfer protein TrbE homolog 809 Bradyrhizobium sp. BTAi1 VirB4/TrbE/CagE Family Unknown
trbE BBta_7744 Conjugal transfer protein TrbE homolog 812 Bradyrhizobium sp. BTAi1 VirB4/TrbE/CagE Family Unknown
avhD4 BBta_p0255 Type IV secretion system protein VirB4 homolog 788 Bradyrhizobium sp. BTAi1 VirB4/TrbE/CagE Family Unknown
avhB4 Bcen_4851 Type IV secretion system protein VirB4 homolog 826 Burkholderia cenocepacia AU 1054 VirB4/TrbE/CagE Family Unknown
avhB4 Bxe_A1756 Type IV secretion system protein VirB4 homolog 830 Burkholderia xenovorans LB400 VirB4/TrbE/CagE Family Unknown
avhB4 Bxe_A2655 Type IV secretion system protein VirB4 homolog 822 Burkholderia xenovorans LB400 VirB4/TrbE/CagE Family Unknown
avhB4 Bxe_C0450 Type IV secretion system protein VirB4 homolog 823 Burkholderia xenovorans LB400 VirB4/TrbE/CagE Family Unknown
avhB4 mlr9251 Type IV secretion system protein VirB4 homolog 803 Mesorhizobium loti MAFF303099 VirB4/TrbE/CagE Family Unknown
trbE mlr6400 Conjugal transfer protein TrbE homolog 816 Mesorhizobium loti MAFF303099 VirB4/TrbE/CagE Family Unknown
trbE Meso_3854 Conjugal transfer protein TrbE homolog 830 Mesorhizobium BNC1 VirB4/TrbE/CagE Family Unknown
trbE Meso_2321 Conjugal transfer protein TrbE homolog 811 Mesorhizobium BNC1 VirB4/TrbE/CagE Family Unknown
avhB4 OTBS_1950 Type IV secretion system protein VirB4 homolog 805 Orientia tsutsugamushi str. Boryong VirB4/TrbE/CagE Family Unknown
avhB4 RHE_PD00146 Type IV secretion system protein VirB4 homolog 795 Rhizobium etli CFN 42 VirB4/TrbE/CagE Family Unknown
avhB4 AAM03033 Type IV secretion system protein VirB4 homolog 858 Helicobacter pylori J99 VirB4/TrbE/CagE Family Unknown
avhB4 HP0459 Type IV secretion system protein VirB4 homolog 858 Helicobacter pylori 26695 VirB4/TrbE/CagE Family Unknown
trbE Meso_0506 Conjugal transfer protein TrbE homolog 812 Mesorhizobium BNC1 VirB4/TrbE/CagE Family Unknown
trbE Saro_0315 Conjugal transfer protein TrbE homolog 821 Novosphingobium aromaticivorans DSM 12444 VirB4/TrbE/CagE Family Unknown
trbE Rmet_1344 Conjugal transfer protein TrbE homolog 819 Ralstonia metallidurans CH34 VirB4/TrbE/CagE Family Unknown
trbE Rmet_1553 Conjugal transfer protein TrbE homolog 809 Ralstonia metallidurans CH34 VirB4/TrbE/CagE Family Unknown
avhB4 XCC2474 Type IV secretion system protein VirB4 homolog 817 Xanthomonas campestris pv. campestris str. ATCC 33913 VirB4/TrbE/CagE Family Unknown
avhB4 gbs1135 Type IV secretion system protein VirB4 homolog 796 Streptococcus agalactiae NEM316 VirB4/TrbE/CagE Family Unknown
avhB4 pNOB8p31 Type IV secretion system protein VirB4 homolog 630 Sulfolobus sp NOB8H2 VirB4/TrbE/CagE Family Unknown
Multiple alignment: Clustalw | Muscle | Phylogenetic trees: ps | pdf | legend:txt Download: Fasta