ORF information
ORF ID TF01025 (frame 1) Gene ID R46_012
Position and sequences 4853...7453(866 aa) Gene Name/synonym traB -
Organism Plasmid R46 Cluster 68 genes
Product Conjugal transfer protein TraB (IncN R46)
1stcategory P-T4SS 2ndcategory VirB4/TrbE/CagE Family
3rdcategory Conjugation
Function Component of a T4SS Tra of transmissible plasmid R46 that encodes a putative mating pair formation complex, which is involved in conjugal transfer of this plasmid
Miscellaneus Plamid R46 was shown to be transmissible to some species of Pseudomonas.
References PubMed:8162189  PubMed:9300052 

Functional Annotation
  KEGG database
Organism B.quintana Gene entry BQ12580
Gene name trwK Synonyms
Definition trwK protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:bqu03080]
Classification Sorting and Degradation
DBLinks GeneID 2867351 GI 49474743 UniProt Q6FYJ0
 
 
COG No results found !

Blast results (KEGG)
B.quintana :  BlastP (output)
Score Expect Query coverage Subject coverage
559 e-157 96.3048 102.9162

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF03135 CagE_TrbE_VirB [ 0 - 429 ] IPR004346 CagE, TrbE, VirB component of type IV transporter system
HMMTigr TIGR00929 VirB4_CagE: type IV secretion/conjugal tra [ 0 - 865 ] IPR004346 CagE, TrbE, VirB component of type IV transporter system

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005524 Molecular Function ATP binding

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
393 e-108 96.3048 103.4898 Q9RPY1 Type IV secretion system protein virB4

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)