ORF information
ORF ID TF00285 (frame 1) Gene ID BP3790
Position and sequences 3992073...3994547(824 aa) Gene Name/synonym ptlC /virB4
Organism Bordetella pertussis Tohama I Cluster 68 genes
Product Type IV secretion system protein PtlC
1stcategory P-T4SS 2ndcategory VirB4/TrbE/CagE Family
3rdcategory Effector translocator
Function Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane.
Miscellaneus Cotranscribed with ptxABCDE. Activated by the two-component regulatory system bvgS/bvgA
References PubMed:8606119  PubMed:9393726  PubMed:10518754  PubMed:15322034 

Functional Annotation
  KEGG database
Organism B.pertussis Gene entry BP3790
Gene name Synonyms
Definition putative bacterial secretion system protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:bpe03080]
Classification Sorting and Degradation
DBLinks GeneDB BP3790 GeneID 2665411 GI 33594645 UniProt Q7VSX9
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 7 .. 821 (815) Type IV secretory pathway, VirB4 components

Blast results (KEGG)
B.pertussis :  BlastP (output)
Score Expect Query coverage Subject coverage
1664 0.0 100.0000 100.0000

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR00929 VirB4_CagE [ 0 - 816 ] IPR004346 CagE, TrbE, VirB component of type IV transporter system

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
1664.0000 0.0 100.0000 100.0000 Q7VSX9 Type IV secretion system protein ptlC (Pertussis toxin liberation protein C)

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)