ORF information
ORF ID TF00985 (frame 1) Gene ID Atu6040
Position and sequences 49875...50276(133 aa) Gene Name/synonym trbC -
Organism Agrobacterium tumefaciens C58 UWash Cluster 22 genes
Product Conjugal transfer protein TrbC homolog
1stcategory P-T4SS 2ndcategory VirB2/TrbC Family
3rdcategory Conjugation
Function Component of the T4SS Tra/Trb that mediates the conjugal transfer of the plasmid pTiC58 between cells of Agrobacterium.
Miscellaneus
References PubMed:9829924  PubMed:10438776  PubMed:2551885  PubMed:10692358 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pTi_87
Gene name Synonyms
Definition conjugal transfer protein TrbC
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142694 GI 16119852 UniProt Q7D2P2
 
 
COG No results found !

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
259 2e-68 100 97.0803

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF04956 TrbC [ 0 - 102 ] IPR007039 Conjugal transfer,TrbC
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
174 6e-44 99.2481 100 P54908 Conjugal transfer protein trbC

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.3909-Affirmative (output)