ORF information
ORF ID TF00096 (frame 1) Gene ID Meso_4338
Position and sequences 241028...242062(344 aa) Gene Name/synonym avhB11 -
Organism Mesorhizobium BNC1 Cluster 206 genes
Product Type IV secretion system protein VirB11 homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Probable conjugation
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism Mesorhizobium_BNC1 Gene entry Meso_4338
Gene name Synonyms
Definition type II secretion system protein E
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:mes03080]
Classification Sorting and Degradation
DBLinks GeneID 4178518 GI 110347137 JGI_p1 Meso4338 UniProt Q11MR1
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 4 .. 327 (324) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
Mesorhizobium_BNC1 :  BlastP (output)
Score Expect Query coverage Subject coverage
668 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMSmart SM00382 AAA [ 0 - 316 ] IPR003593 AAA+ ATPase, core
BlastProDom PD000739 GSPII_E [ 0 - 238 ] IPR001482 Type II secretion system protein E
HMMTigr TIGR02788 VirB11 [ 0 - 326 ] IPR014155 P-type DNA transfer ATPase VirB11

GO (Gene Onthology)
ID Type Description
0000166 Molecular Function nucleotide binding
0017111 Molecular Function nucleoside-triphosphatase activity
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
390 e-108 93.8953 94.1011 Q6FYW0 Type IV secretion system protein virB11

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)