ORF information
ORF ID TF00915 (frame 1) Gene ID RHE_PA00068
Position and sequences 72133...73377(414 aa) Gene Name/synonym virD2 -
Organism Rhizobium etli CFN 42 Cluster 9 genes
Product T-DNA border endonuclease VirD2
1stcategory P-T4SS 2ndcategory Endonuclease_MobA/VirD2 Family
3rdcategory Unknown
Function Component of a DNA transfer and replication (Dtr) protein, which may be a part of the T4SS VirB/D4 encoded on the plasmid p42a and which function remains unknown.
Miscellaneus
References PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0006
Gene name virD Synonyms 2
Definition T-DNA border endonuclease, VirD2 protein [EC:3.1.-.-]
Classification Unassigned
DBLinks GeneID 3894861 GI 86359770 UNAM_a RE1PA0000068 UniProt Q2K2F5
 
 
COG No results found !

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
832 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPIR PIRSF01609 Endonuclease_VirD2 [ 0 - 414 ] IPR016644 Endonuclease, VirD2
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
469 e-131 99.5169 98.8532 P13462 T-DNA border endonuclease virD2

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)