ORF information
ORF ID TF00911 (frame 1) Gene ID Atu6182
Position and sequences 196503...197846(447 aa) Gene Name/synonym virD2 -
Organism Agrobacterium tumefaciens C58 UWash Cluster 9 genes
Product T-DNA border endonuclease VirD2
1stcategory P-T4SS 2ndcategory Endonuclease_MobA/VirD2 Family
3rdcategory T-DNA translocator
Function Component of the T4SS VirB/D4 required for the translocation of the virulence factors (VirE2, VirF and the VirD2-T-DNA complex) to plant cells. VirD2 is a component of a DNA transfer and replication (Dtr) protein. VirD2 nicks the T-DNA at the border repeats, is covalently bound to the 5' end, and is likely transported with the T-strand into the plant cell, where it is involved in nuclear importand integration of the T-DNA into the host genome.
Miscellaneus
References PubMed:2541431 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pTi_21
Gene name virD Synonyms 2
Definition T-DNA border endonuclease virD2 [EC:3.1.-.-]
Classification Unassigned
DBLinks GeneID 1142676 GI 16119798 UniProt P18592
 
 
COG No results found !

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
895 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPIR PIRSF01609 Endonuclease_VirD2 [ 0 - 447 ] IPR016644 Endonuclease, VirD2
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
895 0.0 100 100 P18592 T-DNA border endonuclease virD2

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)