ORF information
ORF ID TF00091 (frame 1) Gene ID mlr6397
Position and sequences 5220586...5221554(322 aa) Gene Name/synonym trbB -
Organism Mesorhizobium loti MAFF303099 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism M.loti Gene entry mlr6397
Gene name traB Synonyms
Definition conjugal transfer protein traB
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:mlo03080]
Classification Sorting and Degradation
DBLinks GeneID 1229571 GI 13475352 Kazusa mlr6397 UniProt Q989J4
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 17 .. 322 (306) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
M.loti :  BlastP (output)
Score Expect Query coverage Subject coverage
621 e-177 100 100
70 5e-11 92.4419 97.546

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR02782 TrbB_P [ 0 - 311 ] IPR014149 P-type conjugative transfer ATPase TrbB
HMMPfam PF00437 GSPII_E [ 0 - 289 ] IPR001482 Type II secretion system protein E
BlastProDom PD000739 GSPII_E [ 0 - 217 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
271 4e-72 89.441 90.0929 P54907 Conjugal transfer protein trbB

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)