ORF information
ORF ID TF00089 (frame 1) Gene ID mlr9260
Position and sequences 237941...238987(348 aa) Gene Name/synonym avhB11 -
Organism Mesorhizobium loti MAFF303099 Cluster 206 genes
Product Type IV secretion system protein VirB11 homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function Component of a type IV secretion system (T4SS) vir homolog.
Miscellaneus
References PubMed:15469524  PubMed:17378428 

Functional Annotation
  KEGG database
Organism M.loti Gene entry mlr9260
Gene name Synonyms
Definition component of type IV secretion system
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:mlo03080]
Classification Sorting and Degradation
DBLinks GeneID 1231438 GI 13488269 Kazusa mlr9260 UniProt Q981R8
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 10 .. 348 (339) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
M.loti :  BlastP (output)
Score Expect Query coverage Subject coverage
685 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF00437 GSPII_E [ 0 - 317 ] IPR001482 Type II secretion system protein E
BlastProDom PD000739 GSPII_E [ 0 - 241 ] IPR001482 Type II secretion system protein E
HMMTigr TIGR02788 VirB11 [ 0 - 327 ] IPR014155 P-type DNA transfer ATPase VirB11

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
197 8e-50 93.9655 95.5056 Q9RNC7 Type IV secretion system protein virB11

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)