ORF information
ORF ID TF00078 (frame 1) Gene ID HP1421
Position and sequences 1490990...1491904(304 aa) Gene Name/synonym trbB -
Organism Helicobacter pylori 26695 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism H.pylori Gene entry HP1421
Gene name trbB Synonyms
Definition conjugative transfer regulon protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:hpy03080]
Classification Sorting and Degradation
DBLinks GeneID 899874 GI 15646030 TIGR HP1421 UniProt O25965
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 20 .. 304 (285) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
H.pylori :  BlastP (output)
Score Expect Query coverage Subject coverage
603 e-171 100 100
69 1e-10 78.7172 83.7423

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
BlastProDom PD000739 GSPII_E [ 0 - 213 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
96.3 2e-19 74.3421 71.517 P54907 Conjugal transfer protein trbB

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)