ORF information
ORF ID TF00067 (frame 1) Gene ID BPSL1893
Position and sequences 2254426...2255769(447 aa) Gene Name/synonym trbB -
Organism Burkholderia pseudomallei K96243 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism B.pseudomallei_1710b Gene entry BURPS1710b
Gene name cpaF Synonyms 2
Definition type II/IV secretion system protein
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:bpm03090]
Classification Sorting and Degradation
DBLinks GeneID 3689016 GI 76811090 UniProt Q3JSW0
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 10 .. 447 (438) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
B.pseudomallei_1710b :  BlastP (output)
Score Expect Query coverage Subject coverage
885 0.0 100 100
60 1e-07 78.7172 83.7423

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF00437 GSPII_E [ 0 - 367 ] IPR001482 Type II secretion system protein E
BlastProDom PD000739 Q8XQY3_RALSO_Q8XQY3; [ 0 - 291 ] IPR001482 Type II secretion system protein E
ScanRegExp PS00387 PPASE [ 0 - 408 ] IPR008162 Inorganic pyrophosphatase

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0000287 Molecular Function magnesium ion binding
0004427 Molecular Function inorganic diphosphatase activity
0005737 Cellular Component cytoplasm
0006796 Biological Process phosphate metabolic process

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
169 2e-41 64.6532 43.4119 Q58191 Uncharacterized protein MJ0781 [Contains: Mja klbA intein]

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2784-Affirmative (output)