ORF information
ORF ID TF00065 (frame 1) Gene ID BPSS2196
Position and sequences 2962850...2964217(455 aa) Gene Name/synonym trbB -
Organism Burkholderia pseudomallei K96243 Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism B.pseudomallei Gene entry BPSS2196
Gene name Synonyms
Definition putative type II/IV secretion system-related protein
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:bps03090]
Classification Sorting and Degradation
DBLinks GeneDB BPSS2196 GeneID 3096667 GI 53723213 UniProt Q63I74
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 31 .. 454 (424) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
B.pseudomallei :  BlastP (output)
Score Expect Query coverage Subject coverage
873 0.0 100 100
72 3e-11 76.6304 87.4233

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPanther PTHR19222 ATP BINDING CASSETE (ABC) TRANSPORTER [ 0 - 257 ] NULL NULL
ScanRegExp PS00227 TUBULIN [ 0 - 237 ] IPR000217 Tubulin
BlastProDom PD000739 Q8Y1N8_RALSO_Q8Y1N8; [ 0 - 302 ] IPR001482 Type II secretion system protein E
HMMPfam PF00437 GSPII_E [ 0 - 378 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005525 Molecular Function GTP binding
0005874 Cellular Component microtubule
0007017 Biological Process microtubule-based process
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
185 3e-46 62.1978 41.6089 Q58191 Uncharacterized protein MJ0781 [Contains: Mja klbA intein]

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)