ORF information
ORF ID TF00580 (frame 1) Gene ID AGR_pTi_89
Position and sequences 83669...84700(343 aa) Gene Name/synonym trbB -
Organism Agrobacterium tumefaciens C58 Cereon Cluster 206 genes
Product Conjugal transfer protein TrbB
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Conjugation
Function Member of the Tra/Trb conjugal system that mediates the conjugal transfer of the plasmid pTiC58 between cells of Agrobacterium. Probably binds ATP.
Miscellaneus
References PubMed:9829924  PubMed:10438776  PubMed:2551885  PubMed:10692358 

Functional Annotation
KEGG Database No results found !
 
COG No results found !

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR02782 TrbB_P: P-type conjugative transfer ATPase T [ 0 - 330 ] IPR014149 P-type conjugative transfer ATPase TrbB
ScanRegExp PS00227 TUBULIN [ 0 - 176 ] IPR000217 Tubulin
ScanRegExp PS00662 T2SP_E [ 0 - 246 ] IPR001482 Type II secretion system protein E
HMMPfam PF00437 GSPII_E [ 0 - 309 ] IPR001482 Type II secretion system protein E
BlastProDom PD000739 Q8U692_AGRT5_Q8U692; [ 0 - 237 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005525 Molecular Function GTP binding
0005874 Cellular Component microtubule
0007017 Biological Process microtubule-based process
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
564 e-160 94.1691 100 P54907 Conjugal transfer protein trbB

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2635-Affirmative (output)