ORF information
ORF ID TF00053 (frame 1) Gene ID BP3796
Position and sequences 3998724...3999743(339 aa) Gene Name/synonym ptlH /virB11
Organism Bordetella pertussis Tohama I Cluster 206 genes
Product Type IV secretion system protein ptlH
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Effector translocator
Function Component of the type IV secretion system ptl required for secretion of assembled pertussis toxin (PTX) through the outer membrane.
Miscellaneus Cotranscribed with ptxABCDE. Activated by the two-component regulatory system bvgS/bvgA
References PubMed:8606119  PubMed:9393726  PubMed:10518754  PubMed:15322034 

Functional Annotation
  KEGG database
Organism B.parapertussis Gene entry BPP4316
Gene name Synonyms
Definition putative bacterial secretion system protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:bpa03080]
Classification Sorting and Degradation
DBLinks GeneDB BPP4316 GeneID 1666317 GI 33598801 UniProt Q7W2T7
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 15 .. 333 (319) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
B.parapertussis :  BlastP (output)
Score Expect Query coverage Subject coverage
688 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
BlastProDom PD000739 Q91UW6_XXXXX_Q91UW6; [ 0 - 240 ] IPR001482 Type II secretion system protein E
HMMPfam PF00437 GSPII_E [ 0 - 319 ] IPR001482 Type II secretion system protein E
HMMPanther PTHR19222 ATP BINDING CASSETE (ABC) TRANSPORTER [ 0 - 198 ] NULL NULL
HMMTigr TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 [ 0 - 332 ] IPR014155 P-type DNA transfer ATPase VirB11
ScanRegExp PS00675 SIGMA54_INTERACT_1 [ 0 - 179 ] IPR002078 RNA polymerase sigma factor 54, interaction

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
PS00675 339 ScanRegExp
PS00675 339 ScanRegExp
0008134 Molecular Function transcription factor binding

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
688 0.0 100 100 Q7VSX3 Type IV secretion system protein ptlH (Pertussis toxin liberation protein H)

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2211-Affirmative (output)