ORF information
ORF ID TF00507 (frame 1) Gene ID RHE_PA00052
Position and sequences 56042...57076(344 aa) Gene Name/synonym avhB11 -
Organism Rhizobium etli CFN 42 Cluster 206 genes
Product Type IV secretion system protein VirB11
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Probable effector translocator
Function Component of a T4SS VirB/D4 encoded in the plasmid p42a. Here, the system is predicted to be an effector translocator that is feasible for experimental testing.
Miscellaneus
References PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0005
Gene name virB Synonyms 11a
Definition transport secretion system IV, VirB11 protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:ret03080]
Classification Sorting and Degradation
DBLinks GeneID 3894809 GI 86359757 UNAM_a RE1PA0000052 UniProt Q2K2E2
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
N 11 .. 343 (333) Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
689 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
BlastProDom PD000739 GSPII_E [ 0 - 238 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
598 e-171 99.7093 100 P0A3F8 Protein virB11

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)