ORF information
ORF ID TF00504 (frame 1) Gene ID RHE_PA00049
Position and sequences 53250...54023(257 aa) Gene Name/synonym virB8 /virB8a
Organism Rhizobium etli CFN 42 Cluster 47 genes
Product Type IV secretion system protein VirB8
1stcategory P-T4SS 2ndcategory VirB8 Family
3rdcategory Probable effector translocator
Function Component of a T4SS VirB/D4 encoded in the plasmid p42a. Here, the system is predicted to be an effector translocator that is feasible for experimental testing.
Miscellaneus
References PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0004
Gene name virB Synonyms 8a
Definition transport secretion system IV, VirB8 protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:ret03080]
Classification Sorting and Degradation
DBLinks GeneID 3894806 GI 86359754 UNAM_a RE1PA0000049 UniProt Q2K2E0
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 38 .. 257 (220) Type IV secretory pathway, component VirB8

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
510 e-143 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
415 e-116 92.2179 100 P17798 Protein virB8

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)