ORF information
ORF ID TF00502 (frame 1) Gene ID AGR_pTi_11
Position and sequences 8701...9414(237 aa) Gene Name/synonym virB8 -
Organism Agrobacterium tumefaciens C58 Cereon Cluster 47 genes
Product Type IV secretion system protein VirB8
1stcategory P-T4SS 2ndcategory VirB8 Family
3rdcategory Effector and T-DNA translocator
Function Component of the T4SS VirB/D4 required for the translocation of the virulence factors (VirE2, VirF and the VirD2-T-DNA complex) to plant cells. VirB8 is an inner-membrane-associated component of T4SS VirB/D4 that functions as a factor determining interaction among T4SS components and thus it directs polar assembly of the membrane-spanning complex. VirB8 initiates T4SS assembly and targets VirB1 to the cell pole. VirB8, together with VirB4, mediates the formation of VirB2-VirB5 pilus pre-assembly complexes.
Miscellaneus VirB8 interacts with itself and VirB1, VirB4, VirB9, VirB10 and VirB11.
References PubMed:17215876 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pTi_11
Gene name virB Synonyms 8
Definition probable virB8 gene
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142668 GI 41223309 UniProt P17798
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 40 .. 237 (198) Type IV secretory pathway, component VirB8

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
466 e-130 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF04335 VirB8 [ 0 - 225 ] IPR007430 VirB8
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
466 e-131 100 100 P17798 Protein virB8

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2147-Affirmative (output)