ORF information
ORF ID TF00501 (frame 1) Gene ID RHE_PA00047
Position and sequences 52239...53126(295 aa) Gene Name/synonym virB6 /virB6a
Organism Rhizobium etli CFN 42 Cluster 67 genes
Product Type IV secretion system protein VirB6
1stcategory P-T4SS 2ndcategory VirB6/TrbL Family
3rdcategory Probable effector translocator
Function Component of a T4SS VirB/D4 encoded in the plasmid p42a. Here, the system is predicted to be an effector translocator that is feasible for experimental testing.
Miscellaneus
References PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0004
Gene name virB Synonyms 6a
Definition transport secretion system IV, VirB6 protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:ret03080]
Classification Sorting and Degradation
DBLinks GeneID 3894804 GI 86359752 UNAM_a RE1PA0000047 UniProt Q2K2D7
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 41 .. 295 (255) Type IV secretory pathway, VirB6 components

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
571 e-162 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
531 e-150 100 100 P17796 Protein virB6

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.4291-Affirmative (output)