ORF information
ORF ID TF00476 (frame 1) Gene ID pRL80124
Position and sequences 130685...131851(388 aa) Gene Name/synonym traB -
Organism Rhizobium leguminosarum bv viciae 3841 Cluster 6 genes
Product Conjugal transfer protein TraB
1stcategory P-T4SS 2ndcategory TraB Family
3rdcategory Conjugation
Function Component of the conjugal Tra/Trb system, which may be required for conjugal transfer of the plasmid pRL8.
Miscellaneus R.leguminosarum biovar viciae (Rlv) strain 3841 (a spontaneous streptomycin-resistant mutant of field isolate 300) has six large plasmids; pRL10 is the pSym (symbiosis plasmid) and pRL7 and pRL8 are transferable by conjugation.
References PubMed:14617175 

Functional Annotation
  KEGG database
Organism R.leguminosarum Gene entry pRL80124
Gene name traB Synonyms
Definition putative transmembrane conjugal transfer protein TraB
Classification Unassigned
DBLinks GeneDB pRL80124 GeneID 4404606 GI 116255183
 
 
COG No results found !

Blast results (KEGG)
R.leguminosarum :  BlastP (output)
Score Expect Query coverage Subject coverage
795 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF07186 TraB_2 [ 0 - 388 ] IPR010804 Conjugal transfer, TraB
HMMPIR PIRSF01793 Conjugal_transfer_TraB_rhizob [ 0 - 388 ] IPR016707 Conjugal transfer, TraB, rhizobiales

GO (Gene Onthology)
ID Type Description
0000746 Biological Process conjugation
0016021 Cellular Component integral to membrane

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
523 e-148 100 100.2584 P55416 Probable conjugal transfer protein traB

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.376-Affirmative (output)