ORF information
ORF ID TF00047 (frame 1) Gene ID AGR_C_373
Position and sequences 222716...224038(440 aa) Gene Name/synonym trbB -
Organism Agrobacterium tumefaciens C58 Cereon Cluster 206 genes
Product Conjugal transfer protein TrbB homolog
1stcategory P-T4SS 2ndcategory VirB11/TrbB/GspE Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_C_373
Gene name cpaF Synonyms
Definition putative pilus assembly protein
Class Genetic Information Processing; Sorting and Degradation; Type II secretion system [PATH:atc03090]
Classification Sorting and Degradation
DBLinks GeneID 1137732 GI 15887570 UniProt Q7D1X7
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 22 .. 440 (419) Flp pilus assembly protein, ATPase CpaF

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
861 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
ScanRegExp PS00227 TUBULIN [ 0 - 222 ] IPR000217 Tubulin
HMMPfam PF00437 GSPII_E [ 0 - 363 ] IPR001482 Type II secretion system protein E
BlastProDom PD000739 Q8UIS4_AGRT5_Q8UIS4; [ 0 - 287 ] IPR001482 Type II secretion system protein E

GO (Gene Onthology)
ID Type Description
0005525 Molecular Function GTP binding
0005874 Cellular Component microtubule
0007017 Biological Process microtubule-based process
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport
0005524 Molecular Function ATP binding
0005622 Cellular Component intracellular
0006810 Biological Process transport

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
177 1e-43 52.2727 33.1484 Q58191 Uncharacterized protein MJ0781 [Contains: Mja klbA intein]

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)