ORF information
ORF ID TF00440 (frame 1) Gene ID SMa1313
Position and sequences 716432...717049(205 aa) Gene Name/synonym avhB5 -
Organism Sinorhizobium meliloti 1021 Cluster 21 genes
Product Type IV secretion system protein VirB5 homolog
1stcategory P-T4SS 2ndcategory VirB5/TrbF Family
3rdcategory Conjugation
Function Component of the T4SS virB/D4 homolog that is required for conjugal transfer of the pSymA. However T4SS virB/D4 homolog is not required for the intracellular survival of the bacteria, thus it appears to be dispensable for plant symbiosis.
Miscellaneus
References PubMed:11481432  PubMed:17158676 

Functional Annotation
  KEGG database
Organism S.meliloti Gene entry SMa1313
Gene name virB Synonyms 5
Definition VirB5 type IV secretion protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:sme03080]
Classification Sorting and Degradation
DBLinks GeneID 1235751 GI 16263168 UniProt Q92YZ7
 
 
COG No results found !

Blast results (KEGG)
S.meliloti :  BlastP (output)
Score Expect Query coverage Subject coverage
393 e-108 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF07996 T4SS [ 0 - 203 ] IPR012991 Type IV secretion system
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
72.8 1e-12 90.2439 79.4118 Q57A18 Type IV secretion system protein virB5 precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2211-Affirmative (output)