ORF information
ORF ID TF00425 (frame 1) Gene ID Atu5166
Position and sequences 164118...164816(232 aa) Gene Name/synonym avhB5 -
Organism Agrobacterium tumefaciens C58 UWash Cluster 21 genes
Product Type IV secretion system protein VirB5 homolog
1stcategory P-T4SS 2ndcategory VirB5/TrbF Family
3rdcategory Conjugation
Function Component of the T4SS AvhB (Agrobacterium virulence homologue virB) that mediates the conjugal transfer of the pAtC58 cryptic plasmid between cells of Agrobacterium. The pAtC58 transfer occurs predominantly under soil and rhizosphere conditions in the absence of tumor or plant wound sites, suggesting that this plasmid may play a key role in these environments.
Miscellaneus Both, pRSF1010 and pTiC58 inhibit conjugal transfer of pAtC58, suggesting an overlap between these delivery systems.
References PubMed:12169609 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pAT_22
Gene name Synonyms
Definition conjugal transfer protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142374 GI 16119390 UniProt Q8UKF1
 
 
COG No results found !

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
447 e-124 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
77 6e-14 90.5172 92.437 Q57A18 Type IV secretion system protein virB5 precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)