ORF information
ORF ID TF00417 (frame 1) Gene ID Atu5168
Position and sequences 166022...166288(88 aa) Gene Name/synonym avhB7 -
Organism Agrobacterium tumefaciens C58 UWash Cluster 8 genes
Product Type IV secretion system protein VirB7 homolog
1stcategory P-T4SS 2ndcategory VirB7 Family
3rdcategory Conjugation
Function Component of the T4SS AvhB (Agrobacterium virulence homologue virB) that mediates the conjugal transfer of the pAtC58 cryptic plasmid between cells of Agrobacterium. The pAtC58 transfer occurs predominantly under soil and rhizosphere conditions in the absence of tumor or plant wound sites, suggesting that this plasmid may play a key role in these environments.
Miscellaneus Both, pRSF1010 and pTiC58 inhibit conjugal transfer of pAtC58, suggesting an overlap between these delivery systems.
References PubMed:12169609 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pAT_22
Gene name Synonyms
Definition putative type IV secretion system protein VirB7
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142376 GI 16119392 UniProt Q7D3R6
 
 
COG No results found !

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
185 3e-46 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
ProfileScan PS51257 PROKAR_LIPOPROTEIN [ 0 - 17 ] NULL NULL
GO (Gene Onthology)
 
GO No results found !
Blast Results (Swiss-Prot)
 
Blast Results (Swiss-Prot) No results found !

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial outer membrane-0.79-Affirmative bacterial inner membrane-0.7-Affirmative (output)