ORF information
ORF ID TF00349 (frame 1) Gene ID pRL70087
Position and sequences 72883...73446(187 aa) Gene Name/synonym traF -
Organism Rhizobium leguminosarum bv viciae 3841 Cluster 24 genes
Product Conjugal transfer protein TraF homolog
1stcategory P-T4SS 2ndcategory Peptidase S26C Family
3rdcategory Probable conjugation
Function Component of an operon encoding Dtr proteins in the plasmid pRL7, which may be required for conjugal transfer of the plasmid.
Miscellaneus R.leguminosarum biovar viciae (Rlv) strain 3841 (a spontaneous streptomycin-resistant mutant of field isolate 300) has six large plasmids; pRL10 is the pSym (symbiosis plasmid) and pRL7 and pRL8 are transferable by conjugation.
References PubMed:14617175 

Functional Annotation
  KEGG database
Organism R.leguminosarum Gene entry pRL70087
Gene name traF Synonyms
Definition putative plasmid transfer protein
Classification Unassigned
DBLinks GeneDB pRL70087 GeneID 4404307 GI 116254985
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
O 15 .. 187 (173) Type IV secretory pathway, protease TraF

Blast results (KEGG)
R.leguminosarum :  BlastP (output)
Score Expect Query coverage Subject coverage
369 e-101 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
239 6e-63 95.1872 97.8723 P55417 Probable conjugal transfer protein traF precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2296-Affirmative (output)