ORF information
ORF ID TF00347 (frame 1) Gene ID RHE_PA00160
Position and sequences 174029...174595(188 aa) Gene Name/synonym traF -
Organism Rhizobium etli CFN 42 Cluster 24 genes
Product Conjugal transfer protein TraF
1stcategory P-T4SS 2ndcategory Peptidase S26C Family
3rdcategory Conjugation
Function Component of the T4SS Tra/Trb involved in conjugal transfer of the self-transmissible plasmid p42a and also, indispensable for conjugal transfer of pSym p42d.
Miscellaneus
References PubMed:12591886  PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0016
Gene name traF Synonyms
Definition conjugal transfer protein F
Classification Unassigned
DBLinks GeneID 3894790 GI 86359858 UNAM_a RE1PA0000160 UniProt Q2K2P6
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
O 11 .. 188 (178) Type IV secretory pathway, protease TraF

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
374 e-103 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMTigr TIGR02771 TraF_Ti: conjugative transfer signal peptida [ 0 - 186 ] IPR014139 Peptidase S26C, conjugative transfer signal peptidase TraF
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
242 6e-64 100 100 P55417 Probable conjugal transfer protein traF precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)