ORF information
ORF ID TF00335 (frame 1) Gene ID RL0772
Position and sequences 833874...838499(1541 aa) Gene Name/synonym traA -
Organism Rhizobium leguminosarum bv viciae 3841 Cluster 7 genes
Product Conjugal transfer protein TraA homolog
1stcategory P-T4SS 2ndcategory MobA/MobL Family
3rdcategory Unknown
Function
Miscellaneus

Functional Annotation
  KEGG database
Organism R.leguminosarum Gene entry RL0772
Gene name traA Synonyms
Definition putative conjugal transfer protein
Classification Unassigned
DBLinks GeneDB RL0772 GeneID 4400825 GI 116250544
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
L 343 .. 1538 (1196) ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Blast results (KEGG)
R.leguminosarum :  BlastP (output)
Score Expect Query coverage Subject coverage
2982 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
ProfileScan PS00036 BZIP_BASIC [ 0 - 28 ] IPR004827 Basic-leucine zipper (bZIP) transcription factor
HMMTigr TIGR02768 TraA_Ti [ 0 - 824 ] IPR014136 Ti-type conjugative transfer relaxase TraA
ProfileScan PS00732 RIBOSOMAL_S16 [ 0 - 925 ] IPR000307 Ribosomal protein S16
ProfileScan PS00105 AA_TRANSFER_CLASS_1 [ 0 - 429 ] IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site

GO (Gene Onthology)
ID Type Description
0003700 Molecular Function transcription factor activity
0005634 Cellular Component nucleus
PS00036 1541 ProfileScan
PS00036 1541 ProfileScan
0043565 Molecular Function sequence-specific DNA binding
0046983 Molecular Function protein dimerization activity
0003735 Molecular Function structural constituent of ribosome
0005622 Cellular Component intracellular
0005840 Cellular Component ribosome
0006412 Biological Process translation
0003824 Molecular Function catalytic activity
0009058 Biological Process biosynthetic process
0030170 Molecular Function pyridoxal phosphate binding

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
639 0.0 98.3777 22.7273 Q44363 Conjugal transfer protein traA

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)