ORF information
ORF ID TF00318 (frame 1) Gene ID Atu5162
Position and sequences 160418...161104(228 aa) Gene Name/synonym avhB1 -
Organism Agrobacterium tumefaciens C58 UWash Cluster 20 genes
Product Type IV secretion system protein VirB1 homolog
1stcategory P-T4SS 2ndcategory VirB1 Family
3rdcategory Conjugation
Function Component of the T4SS AvhB (Agrobacterium virulence homologue virB) that mediates the conjugal transfer of the pAtC58 cryptic plasmid between cells of Agrobacterium. The pAtC58 transfer occurs predominantly under soil and rhizosphere conditions in the absence of tumor or plant wound sites, suggesting that this plasmid may play a key role in these environments.
Miscellaneus Both, pRSF1010 and pTiC58 inhibit conjugal transfer of pAtC58, suggesting an overlap between these delivery systems.
References PubMed:12169609 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pAT_21
Gene name Synonyms
Definition type IV secretion system protein VirB1
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142370 GI 16119386 UniProt Q7D3S2
 
 
COG No results found !

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
448 e-125 100 98.2759
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !
Blast Results (Swiss-Prot)
 
Blast Results (Swiss-Prot) No results found !

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)