ORF information
ORF ID TF00315 (frame 1) Gene ID AGR_pTi_3
Position and sequences 3047...3784(245 aa) Gene Name/synonym virB1 -
Organism Agrobacterium tumefaciens C58 Cereon Cluster 20 genes
Product Type IV secretion system protein VirB1
1stcategory P-T4SS 2ndcategory VirB1 Family
3rdcategory Effector and T-DNA translocator
Function Component of the T4SS VirB/D4 required for the translocation of the virulence factors (VirE2, VirF and the VirD2-T-DNA complex) to plant cells. VirB1 is a bifunctional protein required for virT4SS assemby. The N-terminal lytic transglycosylase domain provides localized lysis of the peptidoglycan cell wall to allow insertion of the T4SS. The C-terminal VirB1* promotes T-pilus assembly through protein-protein interactions with T-pilus subunits.
Miscellaneus The C-terminal third of the protein, VirB1* is cleaved from VirB1 and secreted by an unknwon mechanism.
References PubMed:17631630  PubMed:10852875 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pTi_3
Gene name virB Synonyms 1
Definition ORF1 (virB1) (AA 1 - 252)
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142660 GI 41223307 UniProt P17791
 
 
COG No results found !

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
498 e-140 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
498 e-140 100 100 P17791 Protein virB1 precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)