ORF information
ORF ID TF00272 (frame 1) Gene ID pRL70154
Position and sequences 127018...128205(395 aa) Gene Name/synonym avhB6 -
Organism Rhizobium leguminosarum bv viciae 3841 Cluster 67 genes
Product Type IV secretion system protein VirB6 homolog
1stcategory P-T4SS 2ndcategory VirB6/TrbL Family
3rdcategory Probable conjugation
Function Component of the T4SS VirB/D4 encoded in the plasmid pRL7, which may be required for conjugal transfer of the plasmid.
Miscellaneus R.leguminosarum biovar viciae (Rlv) strain 3841 (a spontaneous streptomycin-resistant mutant of field isolate 300) has six large plasmids; pRL10 is the pSym (symbiosis plasmid) and pRL7 and pRL8 are transferable by conjugation.
References PubMed:14617175 

Functional Annotation
  KEGG database
Organism R.leguminosarum Gene entry pRL70154
Gene name Synonyms
Definition putative transmembrane conjugal transfer protein
Classification Unassigned
DBLinks GeneDB pRL70154 GeneID 4404411 GI 116255041
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 117 .. 371 (255) Type IV secretory pathway, VirB6 components

Blast results (KEGG)
R.leguminosarum :  BlastP (output)
Score Expect Query coverage Subject coverage
768 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF04610 TrbL [ 0 - 291 ] IPR007688 Conjugal transfer, TrbL/VirB6

GO (Gene Onthology)
ID Type Description
0000747 Biological Process conjugation with cellular fusion

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
52.8 3e-06 77.2152 97.5078 Q6FYW5 Type IV secretion system protein virB6

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.3081-Affirmative (output)