Atlas T4SS
ORF information
| ORF ID | TF02226 (frame 1) |
Gene ID | ColIb-P9_p057 |
| Position and sequences | 45091...46161(356 aa) |
Gene Name/synonym |
trbB
- |
| Organism | Plasmid ColIb-P9 |
Cluster |
2 genes |
| Product | Conjugal transfer protein TrbB homolog |
| 1stcategory | I-T4SS |
2ndcategory | Uncharacterized Protein Family TrbB-IncI |
| 3rdcategory | Conjugation |
| Function | Component of the T4SS Tra/Trb of the plasmid Collb-P9, involved in conjugal transfer of the plasmid. |
| Miscellaneus | |
| References |
PubMed:10760136
|
Functional Annotation
| | KEGG database |
| Organism | S.enterica_Heidelber |
Gene entry | SeHA_A0076 |
| Gene name | |
Synonyms | |
| Definition | TrbB Environmental Information Processing; Membrane Transport; Secretion system [BR:seh02044] |
| Classification | Unassigned |
| DBLinks |
GeneID 6487472 GI 194447208 Pfam Thioredoxin PROSITE RIBOSOMAL_L29 UniProt B4T7E8 |
| |
| |
| COG | No results found ! |
Blast results (KEGG)
| S.enterica_Heidelber : BlastP (output) |
| Score |
Expect |
Query coverage |
Subject coverage |
| 716 |
0.0 |
100 |
100 |
|
InterPro
| Evidence |
ID |
Name |
Loci start-end |
InterPro ID |
InterPro Name |
| ProfileScan |
PS00579 |
RIBOSOMAL_L29 |
[ 0 - 191 ] |
IPR001854 |
Ribosomal protein L29 |
|
GO (Gene Onthology)
| ID |
Type |
Description |
| 0003735 |
Molecular Function |
structural constituent of ribosome |
| 0005622 |
Cellular Component |
intracellular |
| 0005840 |
Cellular Component |
ribosome |
| 0006412 |
Biological Process |
translation |
|
Blast Results (Swiss-Prot)
| |
| Blast Results (Swiss-Prot) | No results found ! |
Topology
Protein localization analysis
| |
| Psort |
bacterial inner membrane-0.4227-Affirmative
(output)
|