ORF information
ORF ID TF01997 (frame 1) Gene ID OTBS_1953
Position and sequences 1885858...1889133(1091 aa) Gene Name/synonym avhB6 -
Organism Orientia tsutsugamushi str. Boryong Cluster 5 genes
Product Type IV secretion system protein VirB6-3 homolog
1stcategory P-T4SS 2ndcategory VirB6/TrbL Family
3rdcategory Unknown
Function
Miscellaneus Several virB and virD4 genes of O. tsutsugamushi were transcriptionally active in cultured fibroblast and macrophage cell lines as well as in experimentally infected animals. This finding suggests that the T4SS may function in Orientia and may have a significant role in pathogenesis of scrub typhus.
References PubMed:17483455  PubMed:21458586 

Functional Annotation
  KEGG database
Organism O.tsutsugamushi Gene entry OTBS_1953
Gene name virB Synonyms 6-3
Definition type IV secretion system protein
Classification Unassigned
DBLinks GeneID 5218993 GI 148285053 Pfam TrbL PROSITE SERPIN UniProt A5CFB3
 
 
COG No results found !

Blast results (KEGG)
O.tsutsugamushi :  BlastP (output)
Score Expect Query coverage Subject coverage
2228 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
ProfileScan PS00284 SERPIN [ 0 - 761 ] IPR000215 Protease inhibitor I4, serpin

GO (Gene Onthology)
ID Type Description
0004867 Molecular Function serine-type endopeptidase inhibitor activity

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
476 e-133 96.1503 113.1823 Q9ZE42 RecName: Full=Uncharacterized protein RP106; Flags: Precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort (output)