ORF information
ORF ID TF01964 (frame 1) Gene ID pSB102_p18
Position and sequences 13707...14291(194 aa) Gene Name/synonym traR -
Organism Plasmid pSB102 Cluster 7 genes
Product Conjugal transfer protein TrbM
1stcategory P-T4SS 2ndcategory Uncharacterized Protein Family TrbM-IncP-1
3rdcategory Conjugation
Function Component of the T4SS Tra of the plasmid pSB102 that encoded a putative mating pair formation complex, which may be involved in conjugal transfer of this plasmid. TraR contains an export signal sequence cleavage site, indicating that the TraR protein may be exported.
Miscellaneus
References PubMed:11812851 

Functional Annotation
  KEGG database
Organism Acidovorax_JS42 Gene entry Ajs_4263
Gene name Synonyms
Definition conjugal transfer protein TrbM
Classification Unassigned
DBLinks GeneID 4670478 GI 121582568 JGI Ajs4263 Pfam TrbM UniProt A1WDN7
 
 
COG No results found !

Blast results (KEGG)
Acidovorax_JS42 :  BlastP (output)
Score Expect Query coverage Subject coverage
199 6e-50 98.4536 101.0309

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF07424 TrbM [ 0 - 179 ] IPR009989 TrbM
GO (Gene Onthology)
 
GO No results found !
Blast Results (Swiss-Prot)
 
Blast Results (Swiss-Prot) No results found !

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)