ORF information
ORF ID TF01955 (frame 1) Gene ID RHE_PA00176
Position and sequences 187855...188154(99 aa) Gene Name/synonym trbD -
Organism Rhizobium etli CFN 42 Cluster 19 genes
Product Conjugal transfer protein TrbD homolog
1stcategory P-T4SS 2ndcategory VirB3/TrbD Family
3rdcategory Conjugation
Function Component of the T4SS Tra/Trb involved in conjugal transfer of the self-transmissible plasmid p42a and also, indispensable for conjugal transfer of pSym p42d.
Miscellaneus
References PubMed:12591886  PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0017
Gene name trbD Synonyms
Definition conjugal transfer protein TrbD
Classification Unassigned
DBLinks GeneID 3894881 GI 86359874 Pfam VirB3 RhizoBase RHE_PA00176 UNAM_a RE1PA0000176 UniProt Q2K2R2
 
 
COG No results found !

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
195 6e-49 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPIR PIRSF01785 Type IV secretory pathway, conjugal transfer TrbD component [ 0 - 91 ] IPR016704 Conjugal transfer, TrbD
HMMPfam PF05245 TrbD [ 0 - 98 ] IPR007909 Conjugal transfer, TrbD, subgroup
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
179 4e-45 100 100 P55397 RecName: Full=Probable conjugal transfer protein trbD

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.688-Affirmative (output)