ORF information
ORF ID TF01951 (frame 1) Gene ID pB3_p06
Position and sequences 5332...5643(103 aa) Gene Name/synonym trbD -
Organism Plasmid pB3 Cluster 19 genes
Product Conjugal transfer protein TrbD homolog
1stcategory P-T4SS 2ndcategory VirB3/TrbD Family
3rdcategory Conjugation
Function Component of the T4SS Tra/Trb conjugal transfer encoded in Tra2 region of plasmid IncP-1beta pB3.
Miscellaneus
References PubMed:15528648 

Functional Annotation
  KEGG database
Organism Acidovorax_JS42 Gene entry Ajs_4272
Gene name Synonyms
Definition conjugal transfer protein TrbD
Classification Unassigned
DBLinks GeneID 4670498 GI 121582577 JGI Ajs4272 Pfam VirB3 UniProt A1WDP6
 
 
COG No results found !

Blast results (KEGG)
Acidovorax_JS42 :  BlastP (output)
Score Expect Query coverage Subject coverage
209 3e-53 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF05245 TrbD [ 0 - 103 ] IPR007909 Conjugal transfer, TrbD, subgroup
HMMPIR PIRSF01785 Type IV secretory pathway, conjugal transfer TrbD component [ 0 - 86 ] IPR016704 Conjugal transfer, TrbD
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
89 6e-18 82.5243 85.8586 P55397 RecName: Full=Probable conjugal transfer protein trbD

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2381-Affirmative (output)