ORF information
ORF ID TF01944 (frame 1) Gene ID CAD31433.1
Position and sequences 30645...30905(86 aa) Gene Name/synonym trbD -
Organism Mesorhizobium loti R7A Cluster 19 genes
Product Conjugal transfer protein TrbD homolog
1stcategory P-T4SS 2ndcategory VirB3/TrbD Family
3rdcategory Conjugation
Function Component of a T4SS Tra/Trb encoded in symbiosis island of M. loti R7A, which probably is involved in island transfer via mechanism analogue of conjugation.
Miscellaneus The Mesorhizobium loti strain R7A symbiosis island is a 502-kb chromosomally integrated element which transfers to nonsymbiotic mesorhizobia in the environment, converting them to Lotus symbionts. It integrates into a phenylalanine tRNA gene in a process mediated by a P4-type integrase encoded at the left end of the element.
References PubMed:15469524  PubMed:12003951 

Functional Annotation
  KEGG database
Organism P.lavamentivorans Gene entry Plav_1837
Gene name Synonyms
Definition putative conjugal transfer TrbD transmembrane protein
Classification Unassigned
DBLinks GeneID 5454319 GI 154252287 JGI Plav1837 Pfam VirB3 UniProt A7HU71
 
 
COG No results found !

Blast results (KEGG)
P.lavamentivorans :  BlastP (output)
Score Expect Query coverage Subject coverage
141 1e-32 97.6744 96.5517
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !
Blast Results (Swiss-Prot)
 
Blast Results (Swiss-Prot) No results found !

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.2168-Affirmative (output)