Atlas T4SS
ORF information
| ORF ID | TF01908 (frame 1) |
Gene ID | RHE_PF00440 |
| Position and sequences | 492770...493408(212 aa) |
Gene Name/synonym |
traI
- |
| Organism | Rhizobium etli CFN 42 |
Cluster |
37 genes |
| Product | Autoinducer biosynthetic protein homolog |
| 1stcategory | P-T4SS |
2ndcategory | Autoinducer Synthetase Family |
| 3rdcategory | Unknown |
| Function | Required for the synthesis of autoinducer molecules which bind to raiR and that are involved in the restriction of nodule number. |
| Miscellaneus | |
| References |
PubMed:9473034 
|
Functional Annotation
| | KEGG database |
| Organism | R.etli |
Gene entry | RHE_PF0044 |
| Gene name | raiI |
Synonyms | |
| Definition | autoinducer synthesis protein |
| Classification | Unassigned |
| DBLinks |
GeneID 3895993 GI 86361170 Pfam Autoind_synth PROSITE AUTOINDUCER_SYNTH_1 RhizoBase RHE_PF00440 UNAM_f RE1PF0000440 UniProt Q2JYK6 |
| |
| |
| COG | No results found ! |
Blast results (KEGG)
| R.etli : BlastP (output) |
| Score |
Expect |
Query coverage |
Subject coverage |
| 437 |
e-121 |
100 |
100 |
|
InterPro
| Evidence |
ID |
Name |
Loci start-end |
InterPro ID |
InterPro Name |
| BlastProDom |
PD002752 |
Autoind_synth |
[ 0 - 75 ] |
IPR001690 |
Autoinducer synthesis protein |
| ProfileScan |
PS51187 |
AUTOINDUCER_SYNTH_2 |
[ 0 - 188 ] |
IPR001690 |
Autoinducer synthesis protein |
|
GO (Gene Onthology)
| ID |
Type |
Description |
| 0007165 |
Biological Process |
signal transduction |
| 0007165 |
Biological Process |
signal transduction |
|
Blast Results (Swiss-Prot)
Topology
Protein localization analysis
| |
| Psort |
bacterial inner membrane-0.1786-Affirmative
(output)
|