Atlas T4SS
ORF information
| ORF ID | TF01827 (frame 1) |
Gene ID | pKJK5_17 |
| Position and sequences | 15315...15944(209 aa) |
Gene Name/synonym |
trbN
- |
| Organism | IncP-1 plasmid pKJK5 |
Cluster |
20 genes |
| Product | Conjugal transfer protein TrbN |
| 1stcategory | P-T4SS |
2ndcategory | Uncharacterized Protein Family TrbN-IncP-1 |
| 3rdcategory | Conjugation |
| Function | Component of Tra2 region (trb genes), involved in mating pair formation. |
| Miscellaneus | |
| References |
PubMed:17306874
|
Functional Annotation
| | KEGG database |
| Organism | B.cepacia |
Gene entry | Bamb_6623 |
| Gene name | |
Synonyms | |
| Definition | conjugal transfer protein TrbN |
| Classification | Unassigned |
| DBLinks |
GeneID 4308502 GI 115345515 Pfam SLT PROSITE ALA_RICH UniProt Q0B107 |
| |
| |
| COG | No results found ! |
Blast results (KEGG)
| B.cepacia : BlastP (output) |
| Score |
Expect |
Query coverage |
Subject coverage |
| 333 |
3e-90 |
98.5646 |
97.6303 |
|
InterPro
| Evidence |
ID |
Name |
Loci start-end |
InterPro ID |
InterPro Name |
| HMMPfam |
PF01464 |
SLT |
[ 0 - 136 ] |
IPR008258 |
Lytic transglycosylase-like, catalytic |
|
GO (Gene Onthology)
Blast Results (Swiss-Prot)
| |
| Blast Results (Swiss-Prot) | No results found ! |
Topology
Protein localization analysis
| |
| Psort |
bacterial inner membrane-0.1786-Affirmative
(output)
|