ORF information
ORF ID TF01762 (frame 1) Gene ID BAA97944
Position and sequences 1...121(121 aa) Gene Name/synonym traA -
Organism Plasmid F Cluster 2 genes
Product F-type conjugal transfer protein TraA
1stcategory F-T4SS 2ndcategory TraA-F Family
3rdcategory Conjugation
Function Component of the conjugative T4SS trb/tra required for the transfer of plasmid F among E. coli cells, from donor cells to recipients. The traA gene encodes for pilin, the structural subunit of pili.
Miscellaneus
References PubMed:2877970  PubMed:7915817 

Functional Annotation
  KEGG database
Organism S.typhimurium Gene entry PSLT077
Gene name traA Synonyms
Definition pilus subunit
Classification Unassigned
DBLinks GeneID 1256159 GI 17233443 UniProt Q9X9C7
 
 
COG No results found !

Blast results (KEGG)
S.typhimurium :  BlastP (output)
Score Expect Query coverage Subject coverage
202 2e-51 100 100.8333

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF05513 TraA [ 0 - 120 ] IPR008873 TraA
BlastProDom PD010563 PIL1_ECOLI_P04737; [ 0 - 119 ] NULL NULL
HMMTigr TIGR02758 TraA_TIGR: type IV conjugative transfer sys [ 0 - 121 ] IPR008873 TraA

GO (Gene Onthology)
ID Type Description
0000746 Biological Process conjugation
0005576 Cellular Component extracellular region
0000746 Biological Process conjugation
0005576 Cellular Component extracellular region

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
228 3e-60 100 100 P04737 Fimbrial protein precursor (Pilin)

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.497-Affirmative (output)