ORF information
ORF ID TF00167 (frame 1) Gene ID Atu5170
Position and sequences 166963...167814(283 aa) Gene Name/synonym avhB9 -
Organism Agrobacterium tumefaciens C58 UWash Cluster 67 genes
Product Type IV secretion system protein VirB9 homolog
1stcategory P-T4SS 2ndcategory VirB9/TrbG Family
3rdcategory Conjugation
Function Component of the T4SS AvhB (Agrobacterium virulence homologue virB) that mediates the conjugal transfer of the pAtC58 cryptic plasmid between cells of Agrobacterium. The pAtC58 transfer occurs predominantly under soil and rhizosphere conditions in the absence of tumor or plant wound sites, suggesting that this plasmid may play a key role in these environments
Miscellaneus Change the start position upstream at one codon ! Both, pRSF1010 and pTiC58 inhibit conjugal transfer of pAtC58, suggesting an overlap between these delivery systems.
References PubMed:12169609 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pAT_22
Gene name virB Synonyms 9
Definition virB9 type IV secretion protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142378 GI 16119394 UniProt Q7D3R4
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 9 .. 283 (275) Type IV secretory pathway, VirB9 components

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
558 e-158 100 99.6479
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
324 2e-88 97.5265 96.8858 Q6FYW2 Type IV secretion system protein virB9 precursor

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.1786-Affirmative (output)