ORF information
ORF ID TF00164 (frame 1) Gene ID SMa1303
Position and sequences 712238...713410(390 aa) Gene Name/synonym avhB10 -
Organism Sinorhizobium meliloti 1021 Cluster 68 genes
Product Type IV secretion system protein VirB10 homolog
1stcategory P-T4SS 2ndcategory VirB10/TrbI Family
3rdcategory Conjugation
Function Component of the T4SS virB/D4 homolog that is required for conjugal transfer os the pSymA. However T4SS virB/D4 homolog is not required for the intracellular survival of the bacteria, thus it appears to be dispensable for plant symbiosis.
Miscellaneus
References PubMed:11481432  PubMed:17158676 

Functional Annotation
  KEGG database
Organism S.meliloti Gene entry SMa1303
Gene name virB Synonyms 10
Definition VirB10 transmembrane type IV secretion protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:sme03080]
Classification Sorting and Degradation
DBLinks GeneID 1235746 GI 16263163 UniProt Q92Z02
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 73 .. 390 (318) Type IV secretory pathway, VirB10 components

Blast results (KEGG)
S.meliloti :  BlastP (output)
Score Expect Query coverage Subject coverage
771 0.0 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
357 4e-98 98.9744 103.3766 Q6FYW1 Type IV secretion system protein virB10

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.3527-Affirmative (output)