ORF information
ORF ID TF00160 (frame 1) Gene ID RHE_PA00051
Position and sequences 54898...56001(367 aa) Gene Name/synonym virB10 /virB10a
Organism Rhizobium etli CFN 42 Cluster 68 genes
Product Type IV secretion system protein VirB10
1stcategory P-T4SS 2ndcategory VirB10/TrbI Family
3rdcategory Probable effector translocator
Function Component of a T4SS VirB/D4 encoded in the plasmid p42a. Here, the system is predicted to be an effector translocator that is feasible for experimental testing.
Miscellaneus
References PubMed:12591886  PubMed:15516565 

Functional Annotation
  KEGG database
Organism R.etli Gene entry RHE_PA0005
Gene name virB Synonyms 10a
Definition transport secretion system IV, VirB10 protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:ret03080]
Classification Sorting and Degradation
DBLinks GeneID 3894808 GI 86359756 UNAM_a RE1PA0000051 UniProt Q2K2E3
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 33 .. 366 (334) Type IV secretory pathway, VirB10 components

Blast results (KEGG)
R.etli :  BlastP (output)
Score Expect Query coverage Subject coverage
744 0.0 100 100
InterPro
 
InterPro No results found !
GO (Gene Onthology)
 
GO No results found !

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
563 e-160 99.7275 99.7347 P17800 Protein virB10

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.5373-Affirmative (output)