ORF information
ORF ID TF00120 (frame 1) Gene ID AGR_pAT_231
Position and sequences 168226...169398(390 aa) Gene Name/synonym avhB10 -
Organism Agrobacterium tumefaciens C58 Cereon Cluster 68 genes
Product Type IV secretion system protein VirB10 homolog
1stcategory P-T4SS 2ndcategory VirB10/TrbI Family
3rdcategory Conjugation
Function Component of the T4SS AvhB (Agrobacterium virulence homologue virB) that mediates the conjugal transfer of the pAtC58 cryptic plasmid between cells of Agrobacterium. The pAtC58 transfer occurs predominantly under soil and rhizosphere conditions in the absence of tumor or plant wound sites, suggesting that this plasmid may play a key role in these environments.
Miscellaneus Both, pRSF1010 and pTiC58 inhibit conjugal transfer of pAtC58, suggesting an overlap between these delivery systems.
References PubMed:12169609 

Functional Annotation
  KEGG database
Organism A.tumefaciens_C Gene entry AGR_pAT_23
Gene name virB Synonyms 10
Definition virB10 transmembrane type IV secretion protein
Class Genetic Information Processing; Sorting and Degradation; Type IV secretion system [PATH:atc03080]
Classification Sorting and Degradation
DBLinks GeneID 1142379 GI 16119395 UniProt Q7D3R3
 
  COG Clusters of Orthologous Groups of proteins
 
Gene Classification Coords (size) Product
U 133 .. 390 (258) Type IV secretory pathway, VirB10 components

Blast results (KEGG)
A.tumefaciens_C :  BlastP (output)
Score Expect Query coverage Subject coverage
769 0.0 100 100

InterPro
Evidence ID Name Loci start-end InterPro ID InterPro Name
HMMPfam PF03743 TrbI [ 0 - 362 ] IPR005498 Bacterial conjugation TrbI-like protein

GO (Gene Onthology)
ID Type Description
0009291 Biological Process unidirectional conjugation

Blast Results (Swiss-Prot)
Score Expect Coverage Query Coverage Subject Accesion Number Product (Click to view blast result)
338 3e-92 92.0513 95.5844 Q6FYW1 Type IV secretion system protein virB10

Topology
 
PHOBIUS txt

Protein localization analysis
 
Psort bacterial inner membrane-0.323-Affirmative (output)